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Histone Chip-Seq
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Recommendation for visualizing ChIP-qPCR data?
R
chip-seq
histone chip-seq
ggbio
5.4 years ago
Ramiro Magno
▴ 100
3
votes
2
replies
1.4k
views
diffbind finding not differential site
diffbind
chipseq
histone chip-seq
differential binding analysis
updated 5.5 years ago by
Rory Stark
★ 5.2k • written 5.5 years ago by
woongjaej
• 0
0
votes
2
replies
1.2k
views
Differential ChIP-seq with csaw: How to normalise counts on repetitive regions (telomers)?
csaw
histone chip-seq
chip-seq
updated 6.6 years ago by
Aaron Lun
★ 28k • written 6.6 years ago by
gil.hornung
• 0
12
votes
6
replies
4.7k
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How to select summit size for histone ChiP-Seq in Diffbind
Diffbind
Histone Chip-Seq
Summit size
updated 24 months ago by
Rory Stark
★ 5.2k • written 6.7 years ago by
urjaswita
▴ 40
4 results • Page
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Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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